ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A3KP59_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A3KP59_F1_nD2

A3KP59_F1_nD2

UID: 003878792

AlphaFold

Range: 411-544
AlphaFold: AF-A3KP59
UniProt: A3KP59 (all domains)
Gene: riox1

Protein: Ribosomal oxygenase 1 (Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66) (EC 1.14.11.27, EC 1.14.11.79) (Histone lysine demethylase NO66)

3D Structure

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Related Domains

Browse other domains in RIOX1_C_WH →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyRIOX1_C_WH(101.1.2.194)

Pfam Families

PF21233WHD_RIOX1

Ribosomal oxygenase 1, C-terminal winged helix domain

ClanCL0123HTH

External Links

AlphaFold DB: A3KP59 UniProt: A3KP59

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 411-544