ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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X1WBJ0_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/X1WBJ0_F1_nD2

X1WBJ0_F1_nD2

UID: 003883863

AlphaFold

Range: 91-295
AlphaFold: AF-X1WBJ0
UniProt: X1WBJ0 (all domains)
Gene: trim65

Protein: E3 ubiquitin-protein ligase TRIM65 (Tripartite motif-containing 65)

3D Structure

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Related Domains

Browse other domains in zf-B_box, TRIM_CC →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupB-box zinc-binding domain-like(904)

HH-groupB-box zinc-binding domain(904.1)

TT-groupB-box zinc-binding domain(904.1.1)

FFamilyzf-B_box, TRIM_CC(904.1.1.22)

Pfam Families

PF00643zf-B_box

B-box zinc finger

ClanCL0782BBOX

PF25600TRIM_CC

TRIM protein coiled-coil region

External Links

AlphaFold DB: X1WBJ0 UniProt: X1WBJ0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 91-295