ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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X1WBJ0_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/X1WBJ0_F1_nD3

X1WBJ0_F1_nD3

UID: 003883864

AlphaFold

Range: 326-510
AlphaFold: AF-X1WBJ0
UniProt: X1WBJ0 (all domains)
Gene: trim65

Protein: E3 ubiquitin-protein ligase TRIM65 (Tripartite motif-containing 65)

3D Structure

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Related Domains

Browse other domains in SPRY,PRY →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilySPRY,PRY(10.1.1.9)

Pfam Families

SPRY domain

ClanCL0004Concanavalin

SPRY-associated domain

ClanCL0004Concanavalin

External Links

AlphaFold DB: X1WBJ0 UniProt: X1WBJ0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 326-510