ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F1R498_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/F1R498_F1_nD1

F1R498_F1_nD1

UID: 003889271

AlphaFold

Range: 1-50,71-430
AlphaFold: AF-F1R498
UniProt: F1R498 (all domains)
Gene: rpap3

Protein: RNA polymerase II-associated protein 3

3D Structure

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Related Domains

Browse other domains in TPR_8, TPR_16 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_8, TPR_16(109.4.1.1264)

Pfam Families

Tetratricopeptide repeat

ClanCL0020TPR

Tetratricopeptide repeat

ClanCL0020TPR

External Links

AlphaFold DB: F1R498 UniProt: F1R498

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-50,71-430