ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3m13A2 - ECOD Domain | ECOD

ECOD/Domains/e3m13A2

e3m13A2

UID: 000389261

PDB

Range: A:1-217,A:322-381
PDB: 3M13 chain A(all domains)
UniProt: P40859 (all domains)
Gene: soxA

Molecule: Monomeric sarcosine oxidase

3D Structure

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Related Domains

Browse other domains in FAD dependent oxidoreductase / FAD binding domain →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyFAD dependent oxidoreductase / FAD binding domain(2003.1.2.13)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

FAD dependent oxidoreductase

ClanCL0063NADP_Rossmann

PF01494FAD_binding_3

FAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3M13 RCSB PDB: 3M13 PDBe: 3M13 UniProt: P40859

Downloads

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