ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2wwhA1 - ECOD Domain | ECOD

ECOD/Domains/e2wwhA1

e2wwhA1

UID: 000389399

PDB

Range: A:-1-210
PDB: 2WWH chain A(all domains)
UniProt: Q8I4S1 (all domains)
Gene: TMK

Molecule: THYMIDILATE KINASE, PUTATIVE

3D Structure

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Related Domains

Browse other domains in Thymidylate_kin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyThymidylate_kin(2004.1.1.79)

Ligands

in contact, ≤ 4 Å

p1-(5'-adenosyl)p5-(5'-thymidyl)pentaphosphateT5A
drugDrugBank DB03280
Sodium ionNA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02223Thymidylate_kin

Thymidylate kinase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 2WWH RCSB PDB: 2WWH PDBe: 2WWH UniProt: Q8I4S1

Downloads

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