ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q66ID3_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q66ID3_F1_nD2

Q66ID3_F1_nD2

UID: 003896397

AlphaFold

Range: 181-265
AlphaFold: AF-Q66ID3
UniProt: Q66ID3 (all domains)
Gene: spout1

Protein: 28S rRNA (uridine-N(3))-methyltransferase (EC 2.1.1.-) (Centromere protein 32) (CENP-32) (Kinetochore-associated protein) (SPOUT domain-containing methyltransferase 1)

3D Structure

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Related Domains

Browse other domains in Methyltrn_RNA_3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyMethyltrn_RNA_3(2.1.1.21)

Pfam Families

PF02598Methyltrn_RNA_3

Putative RNA methyltransferase

ClanCL0098SPOUT

External Links

AlphaFold DB: Q66ID3 UniProt: Q66ID3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 181-265