ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3m8aC1 - ECOD Domain | ECOD

ECOD/Domains/e3m8aC1

e3m8aC1

UID: 000389967

PDB

Range: C:0-72
PDB: 3M8A chain C(all domains)
UniProt: C3W611 (all domains)
Gene: NS1

Molecule: Nonstructural protein 1

3D Structure

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Related Domains

Browse other domains in Flu_NS1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupS15/NS1 RNA-binding domain(616)

HH-groupS15/NS1 RNA-binding domain(616.1)

TT-groupS15/NS1 RNA-binding domain(616.1.1)

FFamilyFlu_NS1(616.1.1.3)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 2 additives (Acetate, Malonate Ion)

AcetateACT
DrugBank DB14511
Malonate IonMLI

Pfam Families

PF00600Flu_NS1

Influenza non-structural protein (NS1)

ClanCL0600S15_NS1

External Links

ECOD PDB View: 3M8A RCSB PDB: 3M8A PDBe: 3M8A UniProt: C3W611

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.