ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5RKN3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5RKN3_F1_nD1

Q5RKN3_F1_nD1

UID: 003902134

AlphaFold

Range: 41-155
AlphaFold: AF-Q5RKN3
UniProt: Q5RKN3 (all domains)
Gene: med28

Protein: Mediator of RNA polymerase II transcription subunit 28 (Mediator complex subunit 28)

3D Structure

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Related Domains

Browse other domains in Med28 →

Classification

AArchitecturealpha duplicates or obligate multimers(a.8)

XX-groupMediator hinge subcomplex-like(4207)

HH-groupMediator hinge subcomplex-like(4207.1)

TT-groupRNA polymerase II holoenzyme component SRB7 (MED21)(4207.1.1)

FFamilyMed28(4207.1.1.2)

Pfam Families

Mediator complex subunit 28

External Links

AlphaFold DB: Q5RKN3 UniProt: Q5RKN3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-155