ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3k56B1 - ECOD Domain | ECOD

ECOD/Domains/e3k56B1

e3k56B1

UID: 000390246

PDB

Range: B:1-258
PDB: 3K56 chain B(all domains)
UniProt: Q60352 (all domains)
Gene: MJ0044

Molecule: isopentenyl phosphate kinase

3D Structure

Loading viewer...

Related Domains

Browse other domains in AA_kinase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupCarbamate kinase-like(7531)

HH-groupCarbamate kinase-like(7531.1)

TT-groupCarbamate kinase-like(7531.1.1)

FFamilyAA_kinase(7531.1.1.1)

Ligands

in contact, ≤ 4 Å

Isopentenyl Diphosphate Beta-SIS3

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00696AA_kinase

Amino acid kinase family

External Links

ECOD PDB View: 3K56 RCSB PDB: 3K56 PDBe: 3K56 UniProt: Q60352

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure