ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3lidB2 - ECOD Domain | ECOD

ECOD/Domains/e3lidB2

e3lidB2

UID: 000390346

PDB

Range: B:36-206
PDB: 3LID chain B(all domains)
UniProt: Q87SR8 (all domains)
Gene: VP0354

Molecule: Putative sensory box/GGDEF family protein

3D Structure

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Related Domains

Browse other domains in HK_sensor_dom_bact →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupsensor domains(223.1)

TT-groupsensor domains(223.1.1)

FFamilyHK_sensor_dom_bact(223.1.1.47)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (Phosphate ion, 1,2-ETHANEDIOL)

Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOLEDO

Pfam Families

PF21623HK_sensor_dom_bact

Bacterial histidine kinase, sensor domain

ClanCL0165Cache

External Links

ECOD PDB View: 3LID RCSB PDB: 3LID PDBe: 3LID UniProt: Q87SR8

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.