ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ms5A2 - ECOD Domain | ECOD

ECOD/Domains/e3ms5A2

e3ms5A2

UID: 000391151

PDB

Range: A:0-104
PDB: 3MS5 chain A(all domains)
UniProt: O75936 (all domains)
Gene: BBOX1

Molecule: Gamma-butyrobetaine dioxygenase

3D Structure

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Related Domains

Browse other domains in GBBH-like_N →

Classification

AArchitecturebeta barrels(a.1)

XX-groupXRCC4, N-terminal domain-like(719)

HH-groupNE0471 N-terminal domain-like(719.2)

TT-groupNE0471 N-terminal domain-like(719.2.1)

FFamilyGBBH-like_N(719.2.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF06155GBBH-like_N

Gamma-butyrobetaine hydroxylase-like, N-terminal

External Links

ECOD PDB View: 3MS5 RCSB PDB: 3MS5 PDBe: 3MS5 UniProt: O75936

Downloads

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