ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3l6tB1 - ECOD Domain | ECOD

ECOD/Domains/e3l6tB1

e3l6tB1

UID: 000391470

PDB

Range: B:-2-223
PDB: 3L6T chain B(all domains)
UniProt: Q9X4G2 (all domains)
Gene: traI

Molecule: Mobilization protein TraI

3D Structure

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Related Domains

Browse other domains in TrwC →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupOrigin of replication-binding domains(304.55)

TT-groupOrigin of replication-binding domains(304.55.1)

FFamilyTrwC(304.55.1.8)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
NICKEL (II) IONNI
metal

+ 2 additives (Phosphate ion, 1,2-ETHANEDIOL)

Phosphate ionPO4

Pfam Families

TrwC relaxase

ClanCL0169Rep

External Links

ECOD PDB View: 3L6T RCSB PDB: 3L6T PDBe: 3L6T UniProt: Q9X4G2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.