ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6DG88_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q6DG88_F1_nD1

Q6DG88_F1_nD1

UID: 003917624

AlphaFold

Range: 11-190,216-353
AlphaFold: AF-Q6DG88
UniProt: Q6DG88 (all domains)
Gene: atg4b

Protein: Cysteine protease ATG4B (EC 3.4.22.-) (Autophagy-related protein 4 homolog B)

3D Structure

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Related Domains

Browse other domains in Peptidase_C54 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C54(219.1.1.19)

Pfam Families

PF03416Peptidase_C54

Peptidase C54 catalytic domain

ClanCL0125Peptidase_CA

External Links

AlphaFold DB: Q6DG88 UniProt: Q6DG88

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-190,216-353