ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F1R2X6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/F1R2X6_F1_nD1

F1R2X6_F1_nD1

UID: 003920647

AlphaFold

Range: 1-1825
AlphaFold: AF-F1R2X6
UniProt: F1R2X6 (all domains)
Gene: psme4b

Protein: Proteasome activator complex subunit 4B (Proteasome activator PA200-B)

3D Structure

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Related Domains

Browse other domains in PSME4_C, HEAT_PSME4_mid, HEAT_PSME4 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupProteasome activator BLM10(109.17)

TT-groupProteasome activator BLM10(109.17.1)

FFamilyPSME4_C, HEAT_PSME4_mid, HEAT_PSME4(109.17.1.6)

Pfam Families

PF11919PSME4_C

Proteasome activator complex subunit 4-like, C-terminal

PF16507HEAT_PSME4_mid

Proteasome activator complex subunit 4, mid HEAT repeats region

ClanCL0020TPR

PF23096HEAT_PSME4

Proteasome activator complex subunit 4-like, HEAT repeat-like

ClanCL0020TPR

External Links

AlphaFold DB: F1R2X6 UniProt: F1R2X6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-1825