ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3mbhD1 - ECOD Domain | ECOD

ECOD/Domains/e3mbhD1

e3mbhD1

UID: 000392418

PDB

Range: D:5-290
PDB: 3MBH chain D(all domains)
UniProt: Q89ZB9 (all domains)
Gene: BT_4458

Molecule: Putative phosphomethylpyrimidine kinase

3D Structure

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Related Domains

Browse other domains in Phos_pyr_kin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRibokinase-like(2003.6)

TT-groupRibokinase-like(2003.6.1)

FFamilyPhos_pyr_kin(2003.6.1.5)

Ligands

in contact, ≤ 4 Å

PyridoxalPXL
drugDrugBank DB00147
Chloride ionCL
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08543Phos_pyr_kin

Phosphomethylpyrimidine kinase

ClanCL0118Ribokinase

External Links

ECOD PDB View: 3MBH RCSB PDB: 3MBH PDBe: 3MBH UniProt: Q89ZB9

Downloads

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