ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3myvB1 - ECOD Domain | ECOD

ECOD/Domains/e3myvB1

e3myvB1

UID: 000392535

PDB

Range: B:36-479
PDB: 3MYV chain B(all domains)
UniProt: A6KYC4 (all domains)
Gene: BVU_0732

Molecule: SusD superfamily protein

3D Structure

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Related Domains

Browse other domains in SusD family / Starch-binding associating with outer membrane →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilySusD family / Starch-binding associating with outer membrane(109.4.1.105)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Phosphate ion, 1,2-ETHANEDIOL)

Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07980SusD_RagB

SusD family

ClanCL0020TPR

PF14322SusD-like_3

Starch-binding associating with outer membrane

ClanCL0020TPR

External Links

ECOD PDB View: 3MYV RCSB PDB: 3MYV PDBe: 3MYV UniProt: A6KYC4

Downloads

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