ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3i0aC1 - ECOD Domain | ECOD

ECOD/Domains/e3i0aC1

e3i0aC1

UID: 000392691

PDB

Range: C:3-178
PDB: 3I0A chain C(all domains)
UniProt: P80188 (all domains)
Gene: LCN2

Molecule: Neutrophil gelatinase-associated lipocalin

3D Structure

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Related Domains

Browse other domains in Lipocalin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupLipocalins(9.1)

TT-groupLipocalins(9.1.1)

FFamilyLipocalin(9.1.1.1)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal
N-[(2,3-dihydroxyphenyl)carbonyl]-O-[(2S)-2-{[(2,3-dihydroxyphenyl)carbonyl]amino}-3-({N-[(2,3-dihydroxyphenyl)carbonyl]-L-seryl}oxy)propanoyl]-D-serineMCJ

+ 2 additives (Glycerin, Sulfate ion)

Pfam Families

PF00061Lipocalin

Lipocalin / cytosolic fatty-acid binding protein family

ClanCL0116Calycin

External Links

ECOD PDB View: 3I0A RCSB PDB: 3I0A PDBe: 3I0A UniProt: P80188

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Glycerin

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.