ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3mu3B1 - ECOD Domain | ECOD

ECOD/Domains/e3mu3B1

e3mu3B1

UID: 000392940

PDB

Range: B:21-158
PDB: 3MU3 chain B(all domains)
UniProt: Q90890 (all domains)
Gene: LY86

Molecule: Protein MD-1

3D Structure

Loading viewer...

Related Domains

Browse other domains in E1_DerP2_DerF2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyE1_DerP2_DerF2(11.1.1.37)

Ligands

in contact, ≤ 4 Å

2-deoxy-3-O-[(3R)-3-hydroxytetradecanoyl]-2-{[(3R)-3-hydroxytetradecanoyl]amino}-4-O-phosphono-beta-D-glucopyranoseLP4
(R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATELP5

+ 1 additive (Glycerin)

Pfam Families

PF02221E1_DerP2_DerF2

ML domain

ClanCL0532LIG

External Links

ECOD PDB View: 3MU3 RCSB PDB: 3MU3 PDBe: 3MU3 UniProt: Q90890

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.