ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3mi0V1 - ECOD Domain | ECOD

ECOD/Domains/e3mi0V1

e3mi0V1

UID: 000394208

PDB

Range: V:301-517
PDB: 3MI0 chain V(all domains)
UniProt: P9WHT9 (all domains)
Gene: prcB

Molecule: Proteasome subunit beta

3D Structure

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Related Domains

Browse other domains in Proteasome →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome(210.1.1.1)

Ligands

in contact, ≤ 4 Å

(2R,3S,4R)-2-[(S)-(1S)-cyclohex-2-en-1-yl(hydroxy)methyl]-4-ethyl-3-hydroxy-3-methyl-5-oxopyrrolidine-2-carbaldehydeSA6

+ 1 additive (N,N-dimethylformamide)

N,N-dimethylformamideDMF
DrugBank DB01844

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

External Links

ECOD PDB View: 3MI0 RCSB PDB: 3MI0 PDBe: 3MI0 UniProt: P9WHT9

Downloads

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