ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2wrsA1 - ECOD Domain | ECOD

ECOD/Domains/e2wrsA1

e2wrsA1

UID: 000394306

PDB

Range: A:32-261
PDB: 2WRS chain A(all domains)
UniProt: Q70E11 (all domains)
Gene: blaVIM-4

Molecule: BETA-LACTAMASE VIM-4

3D Structure

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Related Domains

Browse other domains in Lactamase_B →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyLactamase_B(247.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (Citric acid, Citrate anion)

Citric acidCIT
DrugBank DB04272
Citrate anion

Pfam Families

PF00753Lactamase_B

Metallo-beta-lactamase superfamily

ClanCL0381Metallo-HOrase

External Links

ECOD PDB View: 2WRS RCSB PDB: 2WRS PDBe: 2WRS UniProt: Q70E11

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.