ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3mj5B1 - ECOD Domain | ECOD

ECOD/Domains/e3mj5B1

e3mj5B1

UID: 000394543

PDB

Range: B:55-316
PDB: 3MJ5 chain B(all domains)
UniProt: P0C6U8 (all domains)
Gene: 1a

Molecule: Replicase polyprotein 1a

3D Structure

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Related Domains

Browse other domains in CoV_peptidase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyCoV_peptidase(219.1.1.43)

Ligands

in contact, ≤ 4 Å

N-(1,3-benzodioxol-5-ylmethyl)-1-[(1R)-1-naphthalen-1-ylethyl]piperidine-4-carboxamideGRM
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08715CoV_peptidase

Coronavirus papain-like peptidase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 3MJ5 RCSB PDB: 3MJ5 PDBe: 3MJ5 UniProt: P0C6U8

Downloads

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