ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ht3A4 - ECOD Domain | ECOD

ECOD/Domains/e3ht3A4

e3ht3A4

UID: 000394998

PDB

Range: A:298-468
PDB: 3HT3 chain A(all domains)
UniProt: D9N168 (all domains)
Gene: DPO1

Molecule: DNA polymerase I, large fragment

3D Structure

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Related Domains

Browse other domains in DNA_polI_exo1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDNA_polI_exo1(2484.1.1.96)

Ligands

in contact, ≤ 4 Å

2'-Deoxycytidine 5'-triphosphateDCP
drugDrugBank DB03258within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22619DNA_polI_exo1

DNA polymerase I, ribonuclease H-like domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 3HT3 RCSB PDB: 3HT3 PDBe: 3HT3 UniProt: D9N168

Downloads

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