ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9CDE6_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9CDE6_F1_nD2

Q9CDE6_F1_nD2

UID: 003950449

AlphaFold

Range: 31-135
AlphaFold: AF-Q9CDE6
UniProt: Q9CDE6 (all domains)
Gene: pbpA

Protein: Peptidoglycan D,D-transpeptidase PbpA (EC 3.4.16.4) (Penicillin-binding protein A)

3D Structure

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Related Domains

Browse other domains in PBP_dimer_2 →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupPenicillin binding protein dimerisation domain(3702)

HH-groupPenicillin binding protein dimerisation domain(3702.1)

TT-groupPenicillin binding protein dimerisation domain(3702.1.1)

FFamilyPBP_dimer_2(3702.1.1.2)

Pfam Families

PF21922PBP_dimer_2

Penicillin binding protein A dimerisation domain

ClanCL0776PBP_NTD

External Links

AlphaFold DB: Q9CDE6 UniProt: Q9CDE6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 31-135