ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9CBW5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9CBW5_F1_nD1

Q9CBW5_F1_nD1

UID: 003951102

RepresentativeAlphaFold

Range: 1-215,371-455
AlphaFold: AF-Q9CBW5
UniProt: Q9CBW5 (all domains)
Gene: rnj

Protein: Ribonuclease J (RNase J) (EC 3.1.-.-)

3D Structure

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Related Domains

Browse other domains in Lactamase_B, RMMBL, Lactamase_B_2 →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyLactamase_B, RMMBL, Lactamase_B_2(247.1.1.45)

Pfam Families

PF00753Lactamase_B

Metallo-beta-lactamase superfamily

ClanCL0381Metallo-HOrase

Zn-dependent metallo-hydrolase RNA specificity domain

ClanCL0398RMMBL_DRMBL

PF12706Lactamase_B_2

Beta-lactamase superfamily domain

ClanCL0381Metallo-HOrase

External Links

AlphaFold DB: Q9CBW5 UniProt: Q9CBW5

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-215,371-455