ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P9WGZ9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P9WGZ9_F1_nD1

P9WGZ9_F1_nD1

UID: 003951958

AlphaFold

Range: 6-215,371-455
AlphaFold: AF-P9WGZ9
UniProt: P9WGZ9 (all domains)
Gene: rnj

Protein: Ribonuclease J (RNase J) (EC 3.1.-.-) (Beta-lactamase) (EC 3.5.2.6) (Penicillinase)

3D Structure

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Related Domains

Browse other domains in RMMBL,Lactamase_B_2 →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyRMMBL,Lactamase_B_2(247.1.1.18)

Pfam Families

Zn-dependent metallo-hydrolase RNA specificity domain

ClanCL0398RMMBL_DRMBL

PF12706Lactamase_B_2

Beta-lactamase superfamily domain

ClanCL0381Metallo-HOrase

External Links

AlphaFold DB: P9WGZ9 UniProt: P9WGZ9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-215,371-455