ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xg5A2 - ECOD Domain | ECOD

ECOD/Domains/e2xg5A2

e2xg5A2

UID: 000395548

PDB

Range: A:1-124
PDB: 2XG5 chain A(all domains)
UniProt: P15319 (all domains)
Gene: papD

Molecule: CHAPERONE PROTEIN PAPD

3D Structure

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Related Domains

Browse other domains in PapD_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyPapD_N(11.1.1.10)

Ligands

in contact, ≤ 4 Å

(2R,3R)-8-CYCLOPROPYL-7-(NAPHTHALEN-1-YLMETHYL)-5-OXO-2-PHENYL-2,3-DIHYDRO-5H-[1,3]THIAZOLO[3,2-A]PYRIDINE-3-CARBOXYLIC ACIDEC2
(2R)-2-[5-CYCLOPROPYL-6-(HYDROXYSULFANYL)-4-(NAPHTHALEN-1-YLMETHYL)-2-OXOPYRIDIN-1(2H)-YL]-3-PHENYLPROPANOIC ACIDEC5

+ 1 additive (Glycerin)

Glycerin

Pfam Families

Pili and flagellar-assembly chaperone, PapD N-terminal domain

ClanCL0159E-set

External Links

ECOD PDB View: 2XG5 RCSB PDB: 2XG5 PDBe: 2XG5 UniProt: P15319

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.