ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P9WL37_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P9WL37_F1_nD2

P9WL37_F1_nD2

UID: 003955825

AlphaFold

Range: 216-260,281-410
AlphaFold: AF-P9WL37
UniProt: P9WL37 (all domains)
Gene: Rv2885c

Protein: Putative RNA-guided DNA endonuclease Rv2885c (EC 3.1.21.-)

3D Structure

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Related Domains

Browse other domains in OrfB_IS605, Cas12f1-like_TNB →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyOrfB_IS605, Cas12f1-like_TNB(2484.1.1.211)

Pfam Families

PF01385OrfB_IS605

Probable transposase

ClanCL0219RNase_H

PF07282Cas12f1-like_TNB

Cas12f1-like, TNB domain

ClanCL0167Zn_Beta_Ribbon

External Links

AlphaFold DB: P9WL37 UniProt: P9WL37

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 216-260,281-410