ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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X8FDJ1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/X8FDJ1_F1_nD2

X8FDJ1_F1_nD2

UID: 003959568

AlphaFold

Range: 21-55,131-365
AlphaFold: AF-X8FDJ1
UniProt: X8FDJ1 (all domains)

Protein: deleted

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupPenicillin binding protein dimerisation domain(3702)

HH-groupPenicillin binding protein dimerisation domain(3702.1)

TT-groupPenicillin binding protein dimerisation domain(3702.1.1)

FFamilyTranspeptidase(3702.1.1.4)

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

AlphaFold DB: X8FDJ1 UniProt: X8FDJ1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-55,131-365