ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1m56B1 - ECOD Domain | ECOD

ECOD/Domains/e1m56B1

e1m56B1

UID: 000039600

PDB

Range: B:130-283
PDB: 1M56 chain B(all domains)
UniProt: Q03736 (all domains)
Gene: ctaC

Molecule: CYTOCHROME C OXIDASE

3D Structure

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Related Domains

Browse other domains in COX2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupCupredoxin-like(3156)

HH-groupCupredoxin-related(3156.1)

TT-groupCupredoxin-related(3156.1.1)

FFamilyCOX2(3156.1.1.1)

Ligands

in contact, ≤ 4 Å

COPPER (II) IONCU
metal
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Cytochrome C oxidase subunit II, periplasmic domain

ClanCL0026CU_oxidase

External Links

ECOD PDB View: 1M56 RCSB PDB: 1M56 PDBe: 1M56 UniProt: Q03736

Downloads

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