ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xiiB2 - ECOD Domain | ECOD

ECOD/Domains/e2xiiB2

e2xiiB2

UID: 000396114

PDB

Range: B:35-386
PDB: 2XII chain B(all domains)
UniProt: Q8A3I4 (all domains)
Gene: BT_2970

Molecule: ALPHA-L-FUCOSIDASE

3D Structure

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Related Domains

Browse other domains in Alpha_L_fucos →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAlpha_L_fucos(2002.1.1.51)

Ligands

in contact, ≤ 4 Å

9-oxo-N-[[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyl-piperidin-2-yl]methyl]fluorene-1-carboxamideTA9

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ion

Pfam Families

PF01120Alpha_L_fucos

Alpha-L-fucosidase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 2XII RCSB PDB: 2XII PDBe: 2XII UniProt: Q8A3I4

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.