ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3a4vA1 - ECOD Domain | ECOD

ECOD/Domains/e3a4vA1

e3a4vA1

UID: 000396135

PDB

Range: A:1-311
PDB: 3A4V chain A(all domains)
UniProt: Q97BK3 (all domains)
Gene: TVG0440460

Molecule: NDP-sugar epimerase

3D Structure

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Related Domains

Browse other domains in Epimerase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyEpimerase(2003.1.1.20)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128
Pyruvic acidPYR
drugDrugBank DB00119

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

Pfam Families

PF01370Epimerase

NAD dependent epimerase/dehydratase family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3A4V RCSB PDB: 3A4V PDBe: 3A4V UniProt: Q97BK3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.