ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F8B2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F8B2_F1_nD1

Q5F8B2_F1_nD1

UID: 003963203

AlphaFold

Range: 1-285
AlphaFold: AF-Q5F8B2
UniProt: Q5F8B2 (all domains)
Gene: NGO_0874

Protein: Restriction endonuclease NgoMIV

3D Structure

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Related Domains

Browse other domains in NgoMIV_restric →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyNgoMIV_restric(2008.1.1.35)

Pfam Families

PF09015NgoMIV_restric

NgoMIV restriction enzyme

ClanCL0236PDDEXK

External Links

AlphaFold DB: Q5F8B2 UniProt: Q5F8B2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-285