ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5F549_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5F549_F1_nD2

Q5F549_F1_nD2

UID: 003964071

AlphaFold

Range: 61-165
AlphaFold: AF-Q5F549
UniProt: Q5F549 (all domains)
Gene: NGO_0628

Protein: Transposase

3D Structure

Loading viewer...

Related Domains

Browse other domains in DDE_Tnp_IS1595 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDDE_Tnp_IS1595(2484.1.1.107)

Pfam Families

PF12762DDE_Tnp_IS1595

ISXO2-like transposase domain

ClanCL0219RNase_H

External Links

AlphaFold DB: Q5F549 UniProt: Q5F549

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 61-165