ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2x4mD1 - ECOD Domain | ECOD

ECOD/Domains/e2x4mD1

e2x4mD1

UID: 000396695

PDB

Range: D:2-292
PDB: 2X4M chain D(all domains)
UniProt: P17811 (all domains)
Gene: pla

Molecule: COAGULASE/FIBRINOLYSIN

3D Structure

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Related Domains

Browse other domains in Omptin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupOMPT-like(5084.2)

TT-groupOMPT-like(5084.2.1)

FFamilyOmptin(5084.2.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives ((Hydroxyethyloxy)Tri(Ethyloxy)Octane, Sulfate ion)

(Hydroxyethyloxy)Tri(Ethyloxy)OctaneC8E
DrugBank DB04233
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

Omptin family

ClanCL0193MBB

External Links

ECOD PDB View: 2X4M RCSB PDB: 2X4M PDBe: 2X4M UniProt: P17811

Downloads

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Drug annotations from DrugDomain.