ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q9I5Q4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9I5Q4_F1_nD1

Q9I5Q4_F1_nD1

UID: 003968457

AlphaFold

Range: 81-165
AlphaFold: AF-Q9I5Q4
UniProt: Q9I5Q4 (all domains)
Gene: PA0667

Protein: LysM domain-containing protein

3D Structure

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Related Domains

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Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupLysM domain(101.15)

TT-groupLysM domain(101.15.1)

FFamilyOapA(101.15.1.2)

Pfam Families

PF04225LysM_OapA

Opacity-associated protein A LysM-like domain

ClanCL0187LysM

External Links

AlphaFold DB: Q9I5Q4 UniProt: Q9I5Q4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 81-165