ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P15275_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P15275_F1_nD1

P15275_F1_nD1

UID: 003970387

AlphaFold

Range: 1-150
AlphaFold: AF-P15275
UniProt: P15275 (all domains)
Gene: algQ

Protein: Transcriptional regulatory protein AlgQ (Alginate regulatory protein AlgR2)

3D Structure

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Related Domains

Browse other domains in Rsd_AlgQ →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupRegulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ(601.31)

TT-groupRegulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ(601.31.1)

FFamilyRsd_AlgQ(601.31.1.1)

Pfam Families

PF04353Rsd_AlgQ

Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ

External Links

AlphaFold DB: P15275 UniProt: P15275

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-150