ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xbyA1 - ECOD Domain | ECOD

ECOD/Domains/e2xbyA1

e2xbyA1

UID: 000397084

PDB

Range: A:16-245
PDB: 2XBY chain A(all domains)
UniProt: P00742 (all domains)
Gene: F10

Molecule: ACTIVATED FACTOR XA HEAVY CHAIN

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

(3R,4R)-1-METHYLCARBAMOYLMETHYL-PYRROLIDINE-3,4-DICARBOXYLIC ACID 3-[(4-CHLORO-PHENYL)-AMIDE] 4-{[2-FLUORO-4-(2-OXO-2H-PYRIDIN-1-YL)-PHENYL]-AMIDE}63C
Calcium ionCA
metal
Sodium ionNA

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 2XBY RCSB PDB: 2XBY PDBe: 2XBY UniProt: P00742

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.