ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3lojA1 - ECOD Domain | ECOD

ECOD/Domains/e3lojA1

e3lojA1

UID: 000397319

PDB

Range: A:1-154
PDB: 3LOJ chain A(all domains)
UniProt: P9WNS5 (all domains)
Gene: dut

Molecule: Deoxyuridine 5'-triphosphate nucleotidohydrolase

3D Structure

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Related Domains

Browse other domains in dUTPase →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupdUTPase-like(70.2)

TT-groupdUTPase-like(70.2.1)

FFamilydUTPase(70.2.1.1)

Ligands

in contact, ≤ 4 Å

2'-Deoxyuridine 5'-alpha,beta-imido-triphosphateDUP
drugDrugBank DB01965
Magnesium ionMG
metalwithin 5 Å only

+ 2 additives (Glycerin, Tromethamine)

Pfam Families

PF00692dUTPase

dUTPase

ClanCL0153dUTPase

External Links

ECOD PDB View: 3LOJ RCSB PDB: 3LOJ PDBe: 3LOJ UniProt: P9WNS5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL
DrugBank DB09462
TromethamineTRS
DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.