ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xceE1 - ECOD Domain | ECOD

ECOD/Domains/e2xceE1

e2xceE1

UID: 000397551

PDB

Range: E:2-130
PDB: 2XCE chain E(all domains)
UniProt: O31801 (all domains)
Gene: yncF

Molecule: PROBABLE DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE YNCF

3D Structure

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Related Domains

Browse other domains in dUTPase →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupdUTPase-like(70.2)

TT-groupdUTPase-like(70.2.1)

FFamilydUTPase(70.2.1.1)

Ligands

in contact, ≤ 4 Å

2'-Deoxyuridine 5'-alpha,beta-imido-triphosphateDUP
drugDrugBank DB01965
Calcium ionCA
metalwithin 5 Å only

+ 1 additive (Glycerin)

Pfam Families

PF00692dUTPase

dUTPase

ClanCL0153dUTPase

External Links

ECOD PDB View: 2XCE RCSB PDB: 2XCE PDBe: 2XCE UniProt: O31801

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.