ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8ZNV9_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q8ZNV9_F1_nD4

Q8ZNV9_F1_nD4

UID: 003979461

AlphaFold

Range: 281-410
AlphaFold: AF-Q8ZNV9
UniProt: Q8ZNV9 (all domains)
Gene: yebA

Protein: Murein DD-endopeptidase MepM (Murein hydrolase MepM)

3D Structure

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Related Domains

Browse other domains in Peptidase_M23 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325)

HH-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325.1)

TT-groupDuplicated hybrid motif(325.1.6)

FFamilyPeptidase_M23(325.1.6.2)

Pfam Families

PF01551Peptidase_M23

Peptidase family M23

ClanCL0105Hybrid

External Links

AlphaFold DB: Q8ZNV9 UniProt: Q8ZNV9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 281-410