ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8ZNV9_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q8ZNV9_F1_nD3

Q8ZNV9_F1_nD3

UID: 003980991

AlphaFold

Range: 176-280
AlphaFold: AF-Q8ZNV9
UniProt: Q8ZNV9 (all domains)
Gene: yebA

Protein: Murein DD-endopeptidase MepM (Murein hydrolase MepM)

3D Structure

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Related Domains

Browse other domains in Csd3_N2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCsd3 N-terminal domain(3953)

HH-groupCsd3 N-terminal domain(3953.1)

TT-groupCsd3 N-terminal domain(3953.1.1)

FFamilyCsd3_N2(3953.1.1.2)

Pfam Families

PF19425Csd3_N2

Csd3 second domain

External Links

AlphaFold DB: Q8ZNV9 UniProt: Q8ZNV9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 176-280