ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q32CH4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q32CH4_F1_nD2

Q32CH4_F1_nD2

UID: 003982416

AlphaFold

Range: 76-199
AlphaFold: AF-Q32CH4
UniProt: Q32CH4 (all domains)
Gene: SDY_2955

Protein: Type I-E CRISPR-associated protein Cas6/Cse3/CasE

3D Structure

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Related Domains

Browse other domains in CRISPR_assoc →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51)

TT-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51.1)

FFamilyCRISPR_assoc(304.51.1.3)

Pfam Families

PF08798CRISPR_assoc

CRISPR associated protein

ClanCL0362RAMPS-Cas5-like

External Links

AlphaFold DB: Q32CH4 UniProt: Q32CH4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 76-199