ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ixsC1 - ECOD Domain | ECOD

ECOD/Domains/e3ixsC1

e3ixsC1

UID: 000398404

PDB

Range: C:223-333
PDB: 3IXS chain C(all domains)
UniProt: Q99496 (all domains)
Gene: RNF2

Molecule: E3 ubiquitin-protein ligase RING2

3D Structure

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Related Domains

Browse other domains in RAWUL →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyRAWUL(221.1.1.55)

Ligands

in contact, ≤ 4 Å

N-cyclohexyltaurineNHE
drugDrugBank DB03309

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

RAWUL domain RING finger- and WD40-associated ubiquitin-like

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 3IXS RCSB PDB: 3IXS PDBe: 3IXS UniProt: Q99496

Downloads

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