ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q328Q3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q328Q3_F1_nD1

Q328Q3_F1_nD1

UID: 003984750

RepresentativeAlphaFold

Range: 1-125
AlphaFold: AF-Q328Q3
UniProt: Q328Q3 (all domains)
Gene: SDY_4306

Protein: DNA-directed RNA polymerase, beta subunit/140 kD subunit

3D Structure

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Related Domains

Browse other domains in Zn_ribbon_11, DUF7828 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyZn_ribbon_11, DUF7828(375.1.1.295)

Pfam Families

PF11682Zn_ribbon_11

Probable zinc-ribbon

ClanCL0167Zn_Beta_Ribbon

PF25165DUF7828

Domain of unknown function (DUF7828)

ClanCL0888CoiA_N-like

External Links

AlphaFold DB: Q328Q3 UniProt: Q328Q3

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-125