ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1rtyB1 - ECOD Domain | ECOD

ECOD/Domains/e1rtyB1

e1rtyB1

UID: 000003988

RepresentativePDB

Range: B:1-180
PDB: 1RTY chain B(all domains)
UniProt: O34899 (all domains)
Gene: yvqK

Molecule: yvqk protein

3D Structure

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Related Domains

Browse other domains in Cob_adeno_trans →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFerritin/Heme oxygenase/4-helical cytokines(150)

HH-groupCobalamin adenosyltransferase(150.2)

TT-groupCobalamin adenosyltransferase(150.2.1)

FFamilyCob_adeno_trans(150.2.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01923Cob_adeno_trans

Cobalamin adenosyltransferase

ClanCL0601Cob_adeno_trans

External Links

ECOD PDB View: 1RTY RCSB PDB: 1RTY PDBe: 1RTY UniProt: O34899

Downloads

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