ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3nmdD1 - ECOD Domain | ECOD

ECOD/Domains/e3nmdD1

e3nmdD1

UID: 000399742

PDB

Range: D:4-51
PDB: 3NMD chain D(all domains)
UniProt: Q13976 (all domains)
Gene: PRKG1

Molecule: cGMP Dependent PRotein Kinase

3D Structure

Loading viewer...

Related Domains

Browse other domains in PKcGMP_CC →

Classification

AArchitectureextended segments(a.20)

XX-groupPreprotein translocase SecE subunit(5027)

HH-groupPreprotein translocase SecE subunit(5027.1)

TT-groupPreprotein translocase SecE subunit(5027.1.1)

FFamilyPKcGMP_CC(5027.1.1.2)

Ligands

in contact, ≤ 4 Å

Hexane-1,6-DiolHEZ
drugDrugBank DB02210

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF16808PKcGMP_CC

Coiled-coil N-terminus of cGMP-dependent protein kinase

External Links

ECOD PDB View: 3NMD RCSB PDB: 3NMD PDBe: 3NMD UniProt: Q13976

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.