ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ocaB1 - ECOD Domain | ECOD

ECOD/Domains/e3ocaB1

e3ocaB1

UID: 000399796

PDB

Range: B:2-188
PDB: 3OCA chain B(all domains)
UniProt: Q2GI30 (all domains)
Gene: def

Molecule: Peptide deformylase

3D Structure

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Related Domains

Browse other domains in Pep_deformylase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupPeptide deformylase(289)

HH-groupPeptide deformylase(289.1)

TT-groupPeptide deformylase(289.1.1)

FFamilyPep_deformylase(289.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01327Pep_deformylase

Polypeptide deformylase

External Links

ECOD PDB View: 3OCA RCSB PDB: 3OCA PDBe: 3OCA UniProt: Q2GI30

Downloads

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