ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A0N4UC11_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A0N4UC11_F1_nD1

A0A0N4UC11_F1_nD1

UID: 004003654

AlphaFold

Range: 46-270,291-320,341-693
AlphaFold: AF-A0A0N4UC11
UniProt: A0A0N4UC11 (all domains)
Gene: DME_LOCUS8660

Protein: Vacuolar protein sorting-associated protein 52 homolog

3D Structure

Loading viewer...

Related Domains

Browse other domains in Vps52_CC, Vps52_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyVps52_CC, Vps52_C(109.4.1.1307)

Pfam Families

PF04129Vps52_CC

Vps52/Sac2 family, coiled-coil

ClanCL0020TPR

PF20655Vps52_C

Vps52, C-terminal

ClanCL0020TPR

External Links

AlphaFold DB: A0A0N4UC11 UniProt: A0A0N4UC11

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 46-270,291-320,341-693