ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P28916_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P28916_F1_nD2

P28916_F1_nD2

UID: 004008542

AlphaFold

Range: 96-250
AlphaFold: AF-P28916
UniProt: P28916 (all domains)
Gene: ybfD

Protein: H repeat-associated putative transposase YbfD (ORF-H3)

3D Structure

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Related Domains

Browse other domains in DDE_Tnp_1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDDE_Tnp_1(2484.1.1.18)

Pfam Families

PF01609DDE_Tnp_1

Transposase DDE domain

ClanCL0219RNase_H

External Links

AlphaFold DB: P28916 UniProt: P28916

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 96-250